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<p class="MsoNormal"><span lang="EN-US">Hello,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">I am trying to compile getdp under openSuSE 11.1 and I am getting some errors.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">First, I have compiled and installed PETSC with the following parameters:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">export PETSC_DIR=$PWD<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">./configure \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--prefix=/opt/petsc/petsc-3.1-p8 \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-mpi=1 \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-mpi-include=/opt/mpich/ch-p4/include \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-mpi-lib=[/opt/mpich/ch-p4/lib64/libmpich.a,/opt/mpich/ch-p4/lib64/libfmpich.a,/opt/mpich/ch-p4/lib64/libmpichf90.a] \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-mpiexec=/usr/bin/mpiexec \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-debugging=0 \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-clanguage=cxx \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-c-support=1 \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-shared=0 \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--with-x=0 \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--download-mumps=ifneeded \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--download-parmetis=ifneeded \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--download-scalapack=ifneeded \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--download-blacs=ifneeded \<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--download-umfpack=ifneeded <o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">#--with-scalar-type=complex </span><span lang="EN-US" style="font-family:Wingdings">ß</span><span lang="EN-US"> I had to disable this because of the –with-c-support (without C support getdp gives errors).<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Now I a configure getdp as follows:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">./configure --prefix=/opt/getdp/getdp-1.2.1 --enable-petsc --with-petsc-prefix=/opt/petsc/petsc-3.1-p8 --with-petsc-arch=linux-gnu-cxx-opt --disable-arpack --enable-gsl<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">After that make gives an error if you do not edit the variables according to the following diff:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">--- variables~ 2011-05-20 11:29:08.000000000 +0200<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">+++ variables 2011-05-20 11:29:08.000000000 +0200<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">@@ -48,7 +48,7 @@<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"># PETSc stuff<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">PETSC_DIR=/opt/petsc/petsc-3.1-p8<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">PETSC_ARCH=linux-gnu-cxx-opt<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">-include ${PETSC_DIR}/bmake/common/variables<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">+include ${PETSC_DIR}/conf/variables<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"> # How you create a static library on this machine<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"></span>AR=/usr/bin/ar ruvs<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">=== END oft he diff ====<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span lang="EN-US">Now I try to compile everything with make:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: Entering directory `/root/getdp-1.2.1/Main'<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: `../lib/libMain.a' is up to date.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: Leaving directory `/root/getdp-1.2.1/Main'<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: Entering directory `/root/getdp-1.2.1/Parser'<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: `../lib/libParser.a' is up to date.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: Leaving directory `/root/getdp-1.2.1/Parser'<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: Entering directory `/root/getdp-1.2.1/Post'<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">gcc -g -O2 -DHAVE_BLAS_LAPACK -DHAVE_GSL -DHAVE_PETSC -I/opt/petsc/petsc-3.1-p8/include -I/opt/petsc/petsc-3.1-p8/include -I/opt/petsc/petsc-3.1-p8/include -I/opt/mpich/ch-p4/include -I. -I../include -I../DataStr
-I../DofData -I../GeoData -I../Main -I../Numeric -I../Sparskit -I../Function -c -o Pos_Format.o Pos_Format.c<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Pos_Format.c:57: error: ‘TS’ redeclared as different kind of symbol<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">/opt/petsc/petsc-3.1-p8/include/petscts.h:19: error: previous declaration of ‘TS’ was here<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">make[1]: *** [Pos_Format.o] Error 1<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Please help!<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Best regards,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Gheorghe Ardelean.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">+--<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">Dr. Gheorghe ARDELEAN<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">+--------------------------------------------------------------+<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:DE">| Fraunhofer Institut fuer Integrierte Systeme und |<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:DE">| Bauelementetechnologie |<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:DE">| Schottky str. 10 |<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:DE">| D-91058 Erlangen, Germany |<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">| Tel. +49-(0)9131-761265, Fax. +49-(0)9131-761280 |<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">| Email: |<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">| ardelean@iisb.fraunhofer.de |<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:DE">| gheorghe.ardelean@iisb.fraunhofer.de |<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:DE">+-------------------------------------------------------------+<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
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